3D structure

PDB id
6N8L (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UCAAGCGUUCAUAGCGACA
Length
19 nucleotides
Bulged bases
6N8L|1|1|U|2842, 6N8L|1|1|U|2843
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6N8L|1|1|U|2835
6N8L|1|1|C|2836
6N8L|1|1|A|2837
6N8L|1|1|A|2838
6N8L|1|1|G|2839
6N8L|1|1|C|2840
6N8L|1|1|G|2841
6N8L|1|1|U|2842
6N8L|1|1|U|2843
6N8L|1|1|C|2844
6N8L|1|1|A|2845
6N8L|1|1|U|2846
6N8L|1|1|A|2847
6N8L|1|1|G|2848
6N8L|1|1|C|2849
6N8L|1|1|G|2850
6N8L|1|1|A|2851
6N8L|1|1|C|2852
6N8L|1|1|A|2853

Current chains

Chain 1
Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain v
60S ribosomal export protein NMD3

Coloring options:

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