HL_6N8M_001
3D structure
- PDB id
- 6N8M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAACUUAAGCAUAUCAAUAAG
- Length
- 23 nucleotides
- Bulged bases
- 6N8M|1|A|A|40, 6N8M|1|A|A|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8M|1|A|C|31
6N8M|1|A|U|32
6N8M|1|A|G|33
6N8M|1|A|A|34
6N8M|1|A|A|35
6N8M|1|A|C|36
6N8M|1|A|U|37
6N8M|1|A|U|38
6N8M|1|A|A|39
6N8M|1|A|A|40
6N8M|1|A|G|41
6N8M|1|A|C|42
6N8M|1|A|A|43
6N8M|1|A|U|44
6N8M|1|A|A|45
6N8M|1|A|U|46
6N8M|1|A|C|47
6N8M|1|A|A|48
6N8M|1|A|A|49
6N8M|1|A|U|50
6N8M|1|A|A|51
6N8M|1|A|A|52
6N8M|1|A|G|53
Current chains
- Chain A
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain N
- 60S ribosomal protein L13-A
- Chain Q
- 60S ribosomal protein L42-A
- Chain a
- 60S ribosomal protein L15-A
- Chain n
- 60S ribosomal protein L28
- Chain w
- 60S ribosomal protein L37-A
Coloring options: