HL_6N8O_053

3D structure

PDB id

6N8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAUUCAUUUUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8O|1|A|G|2534
6N8O|1|A|A|2535
6N8O|1|A|A|2536
6N8O|1|A|U|2537
6N8O|1|A|U|2538
6N8O|1|A|C|2539
6N8O|1|A|A|2540
6N8O|1|A|U|2541
6N8O|1|A|U|2542
6N8O|1|A|U|2543
6N8O|1|A|U|2544
6N8O|1|A|C|2545

Current chains

Chain A

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains