HL_6N8O_082

3D structure

PDB id

6N8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGCACCUUUGCU

Length

12 nucleotides

Bulged bases

6N8O|1|A|C|1762, 6N8O|1|A|U|1765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N8O|1|A|A|1757
6N8O|1|A|G|1758
6N8O|1|A|C|1759
6N8O|1|A|A|1760
6N8O|1|A|C|1761
6N8O|1|A|C|1762
6N8O|1|A|U|1763
6N8O|1|A|U|1764
6N8O|1|A|U|1765
6N8O|1|A|G|1766
6N8O|1|A|C|1767
6N8O|1|A|U|1768

Current chains

Chain A

Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA

Nearby chains

Chain e

60S ribosomal protein L19-A

Chain h

60S ribosomal protein L22-A