HL_6N9E_111

3D structure

PDB id

6N9E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic CC-Pmn and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

6N9E|1|2A|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9E|1|2A|G|188
6N9E|1|2A|G|189
6N9E|1|2A|A|190
6N9E|1|2A|A|191
6N9E|1|2A|C|192
6N9E|1|2A|U|193
6N9E|1|2A|G|194
6N9E|1|2A|A|195
6N9E|1|2A|A|196
6N9E|1|2A|A|197
6N9E|1|2A|C|198
6N9E|1|2A|A|199
6N9E|1|2A|U|200
6N9E|1|2A|C|201
6N9E|1|2A|U|202
6N9E|1|2A|C|203
6N9E|1|2A|A|204
6N9E|1|2A|G|205
6N9E|1|2A|U|206
6N9E|1|2A|A|207
6N9E|1|2A|C|208

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 27

50S ribosomal protein L34

Chain 28

50S Ribosomal Protein L35

Chain 2P

50S Ribosomal Protein L15