HL_6N9F_028

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUGGCUUAGAAGCAGCCAUC

Length

20 nucleotides

Bulged bases

6N9F|1|1A|A|1116, 6N9F|1|1A|U|1124

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9F|1|1A|G|1105
6N9F|1|1A|U|1106
6N9F|1|1A|G|1108
6N9F|1|1A|G|1109
6N9F|1|1A|C|1110
6N9F|1|1A|U|1111
6N9F|1|1A|U|1112
6N9F|1|1A|A|1113
6N9F|1|1A|G|1114
6N9F|1|1A|A|1115
6N9F|1|1A|A|1116
6N9F|1|1A|G|1117
6N9F|1|1A|C|1118
6N9F|1|1A|A|1119
6N9F|1|1A|G|1120
6N9F|1|1A|C|1121
6N9F|1|1A|C|1122
6N9F|1|1A|A|1123
6N9F|1|1A|U|1124
6N9F|1|1A|C|1125

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1H

50S Ribosomal Protein L6