HL_6N9F_037
3D structure
- PDB id
- 6N9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GGCAAAUCC
- Length
- 9 nucleotides
- Bulged bases
- 6N9F|1|1A|C|1539, 6N9F|1|1A|U|1543
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6N9F_037 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.3892
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27483.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 2
Unit IDs
6N9F|1|1A|G|1537
6N9F|1|1A|G|1538
6N9F|1|1A|C|1539
6N9F|1|1A|A|1540
6N9F|1|1A|A|1541
6N9F|1|1A|A|1542
6N9F|1|1A|U|1543
6N9F|1|1A|C|1544
6N9F|1|1A|C|1545
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1D
- 50S Ribosomal Protein L2
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