HL_6N9F_079

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6N9F|1|1a|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6N9F_079 not in the Motif Atlas

Homologous match to HL_5J7L_009

Geometric discrepancy: 0.2908

The information below is about HL_5J7L_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6N9F|1|1a|C|342
6N9F|1|1a|U|343
6N9F|1|1a|A|344
6N9F|1|1a|C|345
6N9F|1|1a|G|346
6N9F|1|1a|G|347

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1O

50S Ribosomal Protein L14

Chain 1T

50S Ribosomal Protein L19