HL_6N9F_111

3D structure

PDB id

6N9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

6N9F|1|2A|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6N9F|1|2A|G|188
6N9F|1|2A|G|189
6N9F|1|2A|A|190
6N9F|1|2A|A|191
6N9F|1|2A|C|192
6N9F|1|2A|U|193
6N9F|1|2A|G|194
6N9F|1|2A|A|195
6N9F|1|2A|A|196
6N9F|1|2A|A|197
6N9F|1|2A|C|198
6N9F|1|2A|A|199
6N9F|1|2A|U|200
6N9F|1|2A|C|201
6N9F|1|2A|U|202
6N9F|1|2A|C|203
6N9F|1|2A|A|204
6N9F|1|2A|G|205
6N9F|1|2A|U|206
6N9F|1|2A|A|207
6N9F|1|2A|C|208

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 27

50S ribosomal protein L34

Chain 28

50S Ribosomal Protein L35

Chain 2P

50S Ribosomal Protein L15