HL_6NDK_139

3D structure

PDB id

6NDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ASLSufA6 A37.5 bound to the 70S A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6NDK|1|XA|A|1447, 6NDK|1|XA|G|1456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NDK_139 not in the Motif Atlas

Homologous match to HL_6CZR_102

Geometric discrepancy: 0.5203

The information below is about HL_6CZR_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52463.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

1

Unit IDs

6NDK|1|XA|C|1445
6NDK|1|XA|U|1446
6NDK|1|XA|A|1447
6NDK|1|XA|C|1452
6NDK|1|XA|G|1456
6NDK|1|XA|G|1457

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20