HL_6NQB_017
3D structure
- PDB id
- 6NQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCCUUGAGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6NQB_017 not in the Motif Atlas
- Geometric match to HL_1KH6_003
- Geometric discrepancy: 0.283
- The information below is about HL_1KH6_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_05426.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6NQB|1|A|C|839
6NQB|1|A|C|840
6NQB|1|A|C|841
6NQB|1|A|U|842
6NQB|1|A|U|843
6NQB|1|A|G|844
6NQB|1|A|A|845
6NQB|1|A|G|846
6NQB|1|A|G|847
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain R
- 30S ribosomal protein S18
Coloring options: