HL_6NQB_024

3D structure

PDB id

6NQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

6NQB|1|A|C|1136, 6NQB|1|A|C|1137, 6NQB|1|A|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NQB_024 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.32

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NQB|1|A|G|1134
6NQB|1|A|U|1135
6NQB|1|A|C|1136
6NQB|1|A|C|1137
6NQB|1|A|G|1138
6NQB|1|A|G|1139
6NQB|1|A|C|1140

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains