HL_6NSH_023

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NSH_023 not in the Motif Atlas

Geometric match to HL_4O26_001

Geometric discrepancy: 0.2058

The information below is about HL_4O26_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53014.1

Basepair signature

cWW-F

Number of instances in this motif group

2

Unit IDs

6NSH|1|QA|C|1028|||B
6NSH|1|QA|G|1029
6NSH|1|QA|C|1030
6NSH|1|QA|G|1031
6NSH|1|QA|A|1032
6NSH|1|QA|G|1032|||A

Current chains

Chain QA

16S rRNA

Nearby chains

Chain YA

Large subunit ribosomal RNA; LSU rRNA