HL_6NSH_103

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NSH_103 not in the Motif Atlas

Homologous match to HL_7A0S_068

Geometric discrepancy: 0.1019

The information below is about HL_7A0S_068

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

6NSH|1|RA|C|2856
6NSH|1|RA|G|2857
6NSH|1|RA|C|2858
6NSH|1|RA|G|2859
6NSH|1|RA|A|2860
6NSH|1|RA|G|2861

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RT

50S ribosomal protein L19