HL_6NSH_138

3D structure

PDB id

6NSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUUCGG(1MG)AC

Length

9 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 1MG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06059.6

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

6NSH|1|XV|G|31
6NSH|1|XV|U|32
6NSH|1|XV|U|33
6NSH|1|XV|C|34
6NSH|1|XV|G|35
6NSH|1|XV|G|36
6NSH|1|XV|1MG|37
6NSH|1|XV|A|38
6NSH|1|XV|C|39

Current chains

Chain XV

P-site ASLPro

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain XI

30S ribosomal protein S9

Chain XX

mRNA