HL_6NTA_005

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

6NTA|1|QA|U|208, 6NTA|1|QA|U|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NTA_005 not in the Motif Atlas

Geometric match to HL_4V9F_021

Geometric discrepancy: 0.1958

The information below is about HL_4V9F_021

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

6NTA|1|QA|C|201
6NTA|1|QA|U|208
6NTA|1|QA|U|209
6NTA|1|QA|U|210
6NTA|1|QA|G|216

Current chains

Chain QA

16S rRNA

Nearby chains