HL_6NTA_200

3D structure

PDB id

6NTA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified ASL proline bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NTA_200 not in the Motif Atlas

Homologous match to HL_7RQB_060

Geometric discrepancy: 0.1188

The information below is about HL_7RQB_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

6NTA|1|YA|C|2471
6NTA|1|YA|G|2472
6NTA|1|YA|U|2473
6NTA|1|YA|C|2474
6NTA|1|YA|C|2475
6NTA|1|YA|A|2476
6NTA|1|YA|C|2477
6NTA|1|YA|A|2478
6NTA|1|YA|G|2479

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36

Chain YH

50S ribosomal protein L6

Chain YQ

50S ribosomal protein L16