HL_6NWY_013

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NWY_013 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.239

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

6NWY|1|QA|C|522
6NWY|1|QA|A|523
6NWY|1|QA|G|524
6NWY|1|QA|C|525
6NWY|1|QA|C|526
6NWY|1|QA|G|527

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QL

30S ribosomal protein S12