HL_6NWY_049

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGACCACC

Length

8 nucleotides

Bulged bases

6NWY|1|RA|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NWY_049 not in the Motif Atlas

Homologous match to HL_7RQB_014

Geometric discrepancy: 0.1134

The information below is about HL_7RQB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.1

Basepair signature

cWW

Number of instances in this motif group

15

Unit IDs

6NWY|1|RA|G|410
6NWY|1|RA|G|411
6NWY|1|RA|A|412
6NWY|1|RA|C|413
6NWY|1|RA|C|414
6NWY|1|RA|A|415
6NWY|1|RA|C|416
6NWY|1|RA|C|417

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RP

50S ribosomal protein L15