HL_6NWY_134

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GUUCGGC

Length

7 nucleotides

Bulged bases

6NWY|1|XA|U|1136, 6NWY|1|XA|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NWY_134 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.2405

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|XA|G|1134
6NWY|1|XA|U|1135
6NWY|1|XA|U|1136
6NWY|1|XA|C|1137
6NWY|1|XA|G|1138
6NWY|1|XA|G|1139
6NWY|1|XA|C|1140

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XI

30S ribosomal protein S9