HL_6NWY_142
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGUUCGG(1MG)ACG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 1MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6NWY_142 not in the Motif Atlas
- Homologous match to HL_1FIR_002
- Geometric discrepancy: 0.2832
- The information below is about HL_1FIR_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NWY|1|XV|C|30
6NWY|1|XV|G|31
6NWY|1|XV|U|32
6NWY|1|XV|U|33
6NWY|1|XV|C|34
6NWY|1|XV|G|35
6NWY|1|XV|G|36
6NWY|1|XV|1MG|37
6NWY|1|XV|A|38
6NWY|1|XV|C|39
6NWY|1|XV|G|40
Current chains
- Chain XV
- E-site tRNA-Pro
Nearby chains
- Chain XA
- Small subunit ribosomal RNA; SSU rRNA
- Chain XI
- 30S ribosomal protein S9
- Chain XK
- 30S ribosomal protein S11
- Chain XX
- mRNA
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