HL_6NWY_143
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUCGAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6NWY_143 not in the Motif Atlas
- Homologous match to HL_3ZGZ_003
- Geometric discrepancy: 0.1982
- The information below is about HL_3ZGZ_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
6NWY|1|XV|G|53
6NWY|1|XV|U|54
6NWY|1|XV|U|55
6NWY|1|XV|C|56
6NWY|1|XV|G|57
6NWY|1|XV|A|58
6NWY|1|XV|A|59
6NWY|1|XV|U|60
6NWY|1|XV|C|61
Current chains
- Chain XV
- E-site tRNA-Pro
Nearby chains
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: