HL_6NWY_179

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

6NWY|1|YA|U|1396, 6NWY|1|YA|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NWY_179 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1076

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6NWY|1|YA|G|1389
6NWY|1|YA|U|1390
6NWY|1|YA|U|1391
6NWY|1|YA|A|1392
6NWY|1|YA|A|1393
6NWY|1|YA|U|1394
6NWY|1|YA|A|1395
6NWY|1|YA|U|1396
6NWY|1|YA|U|1397
6NWY|1|YA|C|1398

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YX

50S ribosomal protein L23