HL_6O3M_008

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O3M_008 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0841

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6O3M|1|QA|C|320
6O3M|1|QA|A|321
6O3M|1|QA|C|322
6O3M|1|QA|U|323
6O3M|1|QA|G|324
6O3M|1|QA|A|325
6O3M|1|QA|G|326
6O3M|1|QA|A|327
6O3M|1|QA|C|328
6O3M|1|QA|A|329
6O3M|1|QA|C|330
6O3M|1|QA|G|331
6O3M|1|QA|G|332
6O3M|1|QA|G|333

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain QT

30S ribosomal protein S20