HL_6O3M_041

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

6O3M|1|RA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O3M_041 not in the Motif Atlas

Homologous match to HL_7RQB_006

Geometric discrepancy: 0.1368

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

6O3M|1|RA|G|194
6O3M|1|RA|A|195
6O3M|1|RA|A|196
6O3M|1|RA|A|197
6O3M|1|RA|C|198
6O3M|1|RA|A|199
6O3M|1|RA|U|200
6O3M|1|RA|C|201

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RP

50S ribosomal protein L15