HL_6O3M_046

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CAGAG

Length

5 nucleotides

Bulged bases

6O3M|1|RA|G|321, 6O3M|1|RA|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O3M_046 not in the Motif Atlas

Homologous match to HL_7A0S_011

Geometric discrepancy: 0.0735

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

6O3M|1|RA|C|319
6O3M|1|RA|A|320
6O3M|1|RA|G|321
6O3M|1|RA|A|322
6O3M|1|RA|G|323

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RF

50S ribosomal protein L4

Chain RY

50S ribosomal protein L24