HL_6O3M_095

3D structure

PDB id

6O3M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.97 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

6O3M|1|RA|U|2406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O3M_095 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.1141

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

6O3M|1|RA|C|2404
6O3M|1|RA|G|2405
6O3M|1|RA|U|2406
6O3M|1|RA|G|2407
6O3M|1|RA|U|2408
6O3M|1|RA|G|2409
6O3M|1|RA|G|2410
6O3M|1|RA|A|2411
6O3M|1|RA|A|2412
6O3M|1|RA|G|2413

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RP

50S ribosomal protein L15