HL_6O7K_012

3D structure

PDB id

6O7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O7K_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2525

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6O7K|1|g|G|462
6O7K|1|g|U|463
6O7K|1|g|U|464
6O7K|1|g|A|465
6O7K|1|g|A|466
6O7K|1|g|U|467
6O7K|1|g|A|468
6O7K|1|g|C|469
6O7K|1|g|C|470

Current chains

Chain g

16S ribosomal RNA

Nearby chains