HL_6O8W_008

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_008 not in the Motif Atlas

Homologous match to HL_5J7L_141

Geometric discrepancy: 0.1347

The information below is about HL_5J7L_141

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

9

Unit IDs

6O8W|1|A|C|249
6O8W|1|A|G|250
6O8W|1|A|G|251
6O8W|1|A|C|252
6O8W|1|A|G|253
6O8W|1|A|A|254
6O8W|1|A|G|255

Current chains

Chain A

50S subunit

Nearby chains

Chain 5

50S ribosomal protein L35

Chain M

50S ribosomal protein L15

Chain u

Transfer RNA; tRNA