HL_6O8W_016

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGGAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_016 not in the Motif Atlas

Homologous match to HL_4WF9_016

Geometric discrepancy: 0.1203

The information below is about HL_4WF9_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6O8W|1|A|C|527
6O8W|1|A|G|528
6O8W|1|A|G|529
6O8W|1|A|A|530
6O8W|1|A|A|531
6O8W|1|A|G|532

Current chains

Chain A

50S subunit

Nearby chains

Chain T

50S ribosomal protein L22

Chain V

50S ribosomal protein L24