HL_6O8W_017

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGUUAAUG

Length

8 nucleotides

Bulged bases

6O8W|1|A|U|584, 6O8W|1|A|U|587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_017 not in the Motif Atlas

Homologous match to HL_4WF9_017

Geometric discrepancy: 0.2318

The information below is about HL_4WF9_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50318.1

Basepair signature

cWW-cSH-F-F

Number of instances in this motif group

1

Unit IDs

6O8W|1|A|C|581
6O8W|1|A|G|582
6O8W|1|A|U|583
6O8W|1|A|U|584
6O8W|1|A|A|585
6O8W|1|A|A|586
6O8W|1|A|U|587
6O8W|1|A|G|588

Current chains

Chain A

50S subunit

Nearby chains

Chain K

50S ribosomal protein L13

Chain R

50S ribosomal protein L20

Chain S

50S ribosomal protein L21