HL_6O8W_019

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGAAGAG

Length

7 nucleotides

Bulged bases

6O8W|1|A|A|652, 6O8W|1|A|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_019 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2875

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6O8W|1|A|C|649
6O8W|1|A|G|650
6O8W|1|A|A|651
6O8W|1|A|A|652
6O8W|1|A|G|653
6O8W|1|A|A|654
6O8W|1|A|G|655

Current chains

Chain A

50S subunit

Nearby chains

Chain E

50S ribosomal protein L4