HL_6O8W_046

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

6O8W|1|A|U|1822

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_046 not in the Motif Atlas

Homologous match to HL_7RQB_046

Geometric discrepancy: 0.1574

The information below is about HL_7RQB_046

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6O8W|1|A|C|1820
6O8W|1|A|G|1821
6O8W|1|A|U|1822
6O8W|1|A|A|1823
6O8W|1|A|A|1824
6O8W|1|A|G|1825

Current chains

Chain A

50S subunit

Nearby chains

Chain C

50S ribosomal protein L2

Chain Y

50S ribosomal protein L28