HL_6O8W_081

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

6O8W|1|a|A|396

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_081 not in the Motif Atlas

Homologous match to HL_4LFB_010

Geometric discrepancy: 0.416

The information below is about HL_4LFB_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

6O8W|1|a|C|394
6O8W|1|a|G|395
6O8W|1|a|A|396
6O8W|1|a|A|397
6O8W|1|a|A|398
6O8W|1|a|G|399

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16