HL_6O8W_098

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

6O8W|1|a|C|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_098 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.3701

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6O8W|1|a|U|1180
6O8W|1|a|G|1181
6O8W|1|a|A|1182
6O8W|1|a|C|1183
6O8W|1|a|A|1184
6O8W|1|a|A|1185
6O8W|1|a|A|1186

Current chains

Chain a

16S rRNA

Nearby chains

Chain g

30S ribosomal protein S7