HL_6O8W_107

3D structure

PDB id

6O8W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01

Experimental method

ELECTRON MICROSCOPY

Resolution

3.53 Å

Loop

Sequence

AGCUUGCU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8W_107 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2573

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

6O8W|1|A|A|282
6O8W|1|A|G|283
6O8W|1|A|C|284
6O8W|1|A|U|285
6O8W|1|A|U|286
6O8W|1|A|G|287
6O8W|1|A|C|288
6O8W|1|A|U|289

Current chains

Chain A

50S subunit

Nearby chains