HL_6O8X_065

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

UGCCAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8X_065 not in the Motif Atlas

Homologous match to HL_4WF9_061

Geometric discrepancy: 0.1319

The information below is about HL_4WF9_061

Detailed Annotation

Ribsomal LSU H95

Broad Annotation

Ribsomal LSU H95

Motif group

HL_12125.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6O8X|1|A|U|2715
6O8X|1|A|G|2716
6O8X|1|A|C|2717
6O8X|1|A|C|2718
6O8X|1|A|A|2719
6O8X|1|A|A|2720

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L17