HL_6O8X_070
3D structure
- PDB id
- 6O8X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.68 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 6O8X|1|B|G|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6O8X_070 not in the Motif Atlas
- Homologous match to HL_5J7L_203
- Geometric discrepancy: 0.1503
- The information below is about HL_5J7L_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_47787.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6O8X|1|B|C|36
6O8X|1|B|A|37
6O8X|1|B|U|38
6O8X|1|B|G|39
6O8X|1|B|C|40
6O8X|1|B|C|41
6O8X|1|B|G|42
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L31 type B
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain P
- 50S ribosomal protein L18
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