HL_6O8X_089

3D structure

PDB id

6O8X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

GUUUCCGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8X_089 not in the Motif Atlas

Geometric match to HL_8C3A_221

Geometric discrepancy: 0.2548

The information below is about HL_8C3A_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

6O8X|1|a|G|855
6O8X|1|a|U|856
6O8X|1|a|U|857
6O8X|1|a|U|858
6O8X|1|a|C|859
6O8X|1|a|C|860
6O8X|1|a|G|861
6O8X|1|a|C|862

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S18