HL_6O8Z_011

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

UAAAG

Length

5 nucleotides

Bulged bases

6O8Z|1|A|A|358, 6O8Z|1|A|A|359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8Z_011 not in the Motif Atlas

Homologous match to HL_7RQB_011

Geometric discrepancy: 0.1567

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6O8Z|1|A|U|356
6O8Z|1|A|A|357
6O8Z|1|A|A|358
6O8Z|1|A|A|359
6O8Z|1|A|G|360

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4