HL_6O8Z_035

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

6O8Z|1|A|U|1432, 6O8Z|1|A|U|1433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8Z_035 not in the Motif Atlas

Homologous match to HL_4WF9_035

Geometric discrepancy: 0.1674

The information below is about HL_4WF9_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

6O8Z|1|A|G|1425
6O8Z|1|A|U|1426
6O8Z|1|A|U|1427
6O8Z|1|A|G|1428
6O8Z|1|A|A|1429
6O8Z|1|A|U|1430
6O8Z|1|A|A|1431
6O8Z|1|A|U|1432
6O8Z|1|A|U|1433
6O8Z|1|A|C|1434

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L23