HL_6O8Z_076

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGCAUG

Length

6 nucleotides

Bulged bases

6O8Z|1|a|C|201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8Z_076 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1943

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

6O8Z|1|a|C|199
6O8Z|1|a|G|200
6O8Z|1|a|C|201
6O8Z|1|a|A|202
6O8Z|1|a|U|203
6O8Z|1|a|G|204

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17