HL_6O8Z_105

3D structure

PDB id

6O8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

AGAAAUU

Length

7 nucleotides

Bulged bases

6O8Z|1|A|A|821, 6O8Z|1|A|U|824

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O8Z_105 not in the Motif Atlas

Homologous match to HL_5J7L_156

Geometric discrepancy: 0.1647

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

6O8Z|1|A|A|819
6O8Z|1|A|G|820
6O8Z|1|A|A|821
6O8Z|1|A|A|822
6O8Z|1|A|A|823
6O8Z|1|A|U|824
6O8Z|1|A|U|825

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2