HL_6O97_028

3D structure

PDB id

6O97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GUGGCUUAGAAGCAGCCAUC

Length

20 nucleotides

Bulged bases

6O97|1|1A|A|1067, 6O97|1|1A|G|1068, 6O97|1|1A|A|1070, 6O97|1|1A|C|1076

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O97|1|1A|G|1059
6O97|1|1A|U|1060
6O97|1|1A|G|1062
6O97|1|1A|G|1063
6O97|1|1A|C|1064
6O97|1|1A|U|1065
6O97|1|1A|U|1066
6O97|1|1A|A|1067
6O97|1|1A|G|1068
6O97|1|1A|A|1069
6O97|1|1A|A|1070
6O97|1|1A|G|1071
6O97|1|1A|C|1072
6O97|1|1A|A|1073
6O97|1|1A|G|1074
6O97|1|1A|C|1075
6O97|1|1A|C|1076
6O97|1|1A|A|1077
6O97|1|1A|U|1078
6O97|1|1A|C|1079

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains