HL_6O97_229

3D structure

PDB id

6O97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GCUAGGGGGCCCACCAGCCUACCAAAC

Length

27 nucleotides

Bulged bases

6O97|1|2A|G|892, 6O97|1|2A|C|893, 6O97|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O97|1|2A|G|875
6O97|1|2A|C|876
6O97|1|2A|U|877
6O97|1|2A|A|878
6O97|1|2A|G|879
6O97|1|2A|G|880
6O97|1|2A|G|881
6O97|1|2A|G|882
6O97|1|2A|G|883
6O97|1|2A|C|884
6O97|1|2A|C|885
6O97|1|2A|C|886
6O97|1|2A|A|887
6O97|1|2A|C|888
6O97|1|2A|C|889
6O97|1|2A|A|890
6O97|1|2A|G|892
6O97|1|2A|C|893
6O97|1|2A|C|894
6O97|1|2A|U|895
6O97|1|2A|A|896
6O97|1|2A|C|897
6O97|1|2A|C|898
6O97|1|2A|A|899
6O97|1|2A|A|900
6O97|1|2A|A|901
6O97|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA