HL_6O9J_012

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

6O9J|1|B|U|321, 6O9J|1|B|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9J_012 not in the Motif Atlas

Homologous match to HL_7A0S_011

Geometric discrepancy: 0.1106

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

6O9J|1|B|G|319
6O9J|1|B|A|320
6O9J|1|B|U|321
6O9J|1|B|A|322
6O9J|1|B|C|323

Current chains

Chain B

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4