3D structure

PDB id
6O9J (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S Elongation Competent Ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
CGAAUAG
Length
7 nucleotides
Bulged bases
6O9J|1|B|A|613, 6O9J|1|B|U|615
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6O9J_020 not in the Motif Atlas
Homologous match to HL_5J7L_151
Geometric discrepancy: 0.2383
The information below is about HL_5J7L_151
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_80922.2
Basepair signature
cWW-tSH-F
Number of instances in this motif group
3

Unit IDs

6O9J|1|B|C|611
6O9J|1|B|G|612
6O9J|1|B|A|613
6O9J|1|B|A|614
6O9J|1|B|U|615
6O9J|1|B|A|616
6O9J|1|B|G|617

Current chains

Chain B
23S rRNA

Nearby chains

Chain E
50S ribosomal protein L4

Coloring options:


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