HL_6O9J_029

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9J_029 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.3643

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6O9J|1|B|G|978
6O9J|1|B|A|979
6O9J|1|B|A|980
6O9J|1|B|A|981
6O9J|1|B|C|982
6O9J|1|B|A|983
6O9J|1|B|A|984
6O9J|1|B|C|985

Current chains

Chain B

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20