HL_6O9J_091

3D structure

PDB id

6O9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Elongation Competent Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O9J_091 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.0837

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6O9J|1|a|C|897
6O9J|1|a|G|898
6O9J|1|a|C|899
6O9J|1|a|A|900
6O9J|1|a|A|901
6O9J|1|a|G|902

Current chains

Chain a

16S rRNA

Nearby chains

Chain B

Large subunit ribosomal RNA; LSU rRNA