3D structure

PDB id
6O9K (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S initiation complex
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
UUUA
Length
4 nucleotides
Bulged bases
6O9K|1|A|U|2797
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6O9K_067 not in the Motif Atlas
Geometric match to HL_4V88_192
Geometric discrepancy: 0.2331
The information below is about HL_4V88_192
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_43793.1
Basepair signature
cWW-F
Number of instances in this motif group
50

Unit IDs

6O9K|1|A|U|2796
6O9K|1|A|U|2797
6O9K|1|A|U|2798
6O9K|1|A|A|2799

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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